Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv20A0A0B4J1H5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv20A0A0B4J1H5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.09■□□□□ 0.65
Trbv20A0A0B4J1H5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv20A0A0B4J1H5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv20A0A0B4J1H5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.09■□□□□ 0.65
Trbv20A0A0B4J1H5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv20A0A0B4J1H5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv20A0A0B4J1H5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
Trbv20A0A0B4J1H5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv20A0A0B4J1H5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv20A0A0B4J1H5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv20A0A0B4J1H5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv20A0A0B4J1H5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv20A0A0B4J1H5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv20A0A0B4J1H5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Gm4799-201ENSMUST00000095396 657 ntBASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.05■□□□□ 0.64
Trbv20A0A0B4J1H5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv20A0A0B4J1H5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
Trbv20A0A0B4J1H5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Terc-201ENSMUST00000082862 423 ntBASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv20A0A0B4J1H5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trbv20A0A0B4J1H5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trbv20A0A0B4J1H5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.63
Trbv20A0A0B4J1H5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv20A0A0B4J1H5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm15043-201ENSMUST00000118843 1543 ntBASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm34220-201ENSMUST00000223001 2709 ntBASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trbv20A0A0B4J1H5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv20A0A0B4J1H5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv20A0A0B4J1H5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv20A0A0B4J1H5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trbv20A0A0B4J1H5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv20A0A0B4J1H5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv20A0A0B4J1H5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.98■□□□□ 0.63
Trbv20A0A0B4J1H5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trbv20A0A0B4J1H5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv20A0A0B4J1H5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv20A0A0B4J1H5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv20A0A0B4J1H5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv20A0A0B4J1H5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms