Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Trbv3A0A0A6YYE2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv3A0A0A6YYE2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv3A0A0A6YYE2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv3A0A0A6YYE2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.44■□□□□ 0.22
Trbv3A0A0A6YYE2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv3A0A0A6YYE2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv3A0A0A6YYE2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv3A0A0A6YYE2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv3A0A0A6YYE2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.44■□□□□ 0.22
Trbv3A0A0A6YYE2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv3A0A0A6YYE2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv3A0A0A6YYE2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv3A0A0A6YYE2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv3A0A0A6YYE2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv3A0A0A6YYE2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv3A0A0A6YYE2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv3A0A0A6YYE2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv3A0A0A6YYE2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv3A0A0A6YYE2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv3A0A0A6YYE2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv3A0A0A6YYE2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv3A0A0A6YYE2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv3A0A0A6YYE2 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.42■□□□□ 0.22
Trbv3A0A0A6YYE2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv3A0A0A6YYE2 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.42■□□□□ 0.22
Trbv3A0A0A6YYE2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv3A0A0A6YYE2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trbv3A0A0A6YYE2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv3A0A0A6YYE2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv3A0A0A6YYE2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv3A0A0A6YYE2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv3A0A0A6YYE2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Trbv3A0A0A6YYE2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv3A0A0A6YYE2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv3A0A0A6YYE2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv3A0A0A6YYE2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv3A0A0A6YYE2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv3A0A0A6YYE2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv3A0A0A6YYE2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trbv3A0A0A6YYE2 Gm9812-201ENSMUST00000061934 968 ntBASIC16.4■□□□□ 0.22
Trbv3A0A0A6YYE2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.39■□□□□ 0.21
Trbv3A0A0A6YYE2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv3A0A0A6YYE2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv3A0A0A6YYE2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv3A0A0A6YYE2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbv3A0A0A6YYE2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv3A0A0A6YYE2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv3A0A0A6YYE2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv3A0A0A6YYE2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv3A0A0A6YYE2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trbv3A0A0A6YYE2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trbv3A0A0A6YYE2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv3A0A0A6YYE2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv3A0A0A6YYE2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv3A0A0A6YYE2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv3A0A0A6YYE2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.38■□□□□ 0.21
Trbv3A0A0A6YYE2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.38■□□□□ 0.21
Trbv3A0A0A6YYE2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.38■□□□□ 0.21
Trbv3A0A0A6YYE2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.38■□□□□ 0.21
Trbv3A0A0A6YYE2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv3A0A0A6YYE2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv3A0A0A6YYE2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv3A0A0A6YYE2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trbv3A0A0A6YYE2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv3A0A0A6YYE2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv3A0A0A6YYE2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv3A0A0A6YYE2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv3A0A0A6YYE2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv3A0A0A6YYE2 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.36■□□□□ 0.21
Trbv3A0A0A6YYE2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv3A0A0A6YYE2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv3A0A0A6YYE2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.35■□□□□ 0.21
Trbv3A0A0A6YYE2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.35■□□□□ 0.21
Trbv3A0A0A6YYE2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv3A0A0A6YYE2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv3A0A0A6YYE2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv3A0A0A6YYE2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv3A0A0A6YYE2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv3A0A0A6YYE2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trbv3A0A0A6YYE2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv3A0A0A6YYE2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv3A0A0A6YYE2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv3A0A0A6YYE2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Trbv3A0A0A6YYE2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv3A0A0A6YYE2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Trbv3A0A0A6YYE2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv3A0A0A6YYE2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv3A0A0A6YYE2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv3A0A0A6YYE2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv3A0A0A6YYE2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv3A0A0A6YYE2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv3A0A0A6YYE2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv3A0A0A6YYE2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trbv3A0A0A6YYE2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv3A0A0A6YYE2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv3A0A0A6YYE2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv3A0A0A6YYE2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv3A0A0A6YYE2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv3A0A0A6YYE2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms