Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Gm7432-201ENSMUST00000210343 879 ntBASIC14.62□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.61□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Gm11599-201ENSMUST00000118720 878 ntBASIC14.59□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Trav13-4-dv7A0A075B6C2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.58□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.56□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13-4-dv7A0A075B6C2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms