Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-5A0A075B6B5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-5A0A075B6B5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav6-5A0A075B6B5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trav6-5A0A075B6B5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-5A0A075B6B5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-5A0A075B6B5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-5A0A075B6B5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-5A0A075B6B5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav6-5A0A075B6B5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-5A0A075B6B5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav6-5A0A075B6B5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-5A0A075B6B5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-5A0A075B6B5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-5A0A075B6B5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-5A0A075B6B5 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.49■□□□□ 0.23
Trav6-5A0A075B6B5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.48■□□□□ 0.23
Trav6-5A0A075B6B5 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.47■□□□□ 0.23
Trav6-5A0A075B6B5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-5A0A075B6B5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-5A0A075B6B5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-5A0A075B6B5 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.47■□□□□ 0.23
Trav6-5A0A075B6B5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-5A0A075B6B5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav6-5A0A075B6B5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-5A0A075B6B5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-5A0A075B6B5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-5A0A075B6B5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav6-5A0A075B6B5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-5A0A075B6B5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-5A0A075B6B5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-5A0A075B6B5 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.45■□□□□ 0.22
Trav6-5A0A075B6B5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav6-5A0A075B6B5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav6-5A0A075B6B5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-5A0A075B6B5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-5A0A075B6B5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.44■□□□□ 0.22
Trav6-5A0A075B6B5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-5A0A075B6B5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav6-5A0A075B6B5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-5A0A075B6B5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-5A0A075B6B5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-5A0A075B6B5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-5A0A075B6B5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-5A0A075B6B5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-5A0A075B6B5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-5A0A075B6B5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-5A0A075B6B5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav6-5A0A075B6B5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6-5A0A075B6B5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav6-5A0A075B6B5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav6-5A0A075B6B5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-5A0A075B6B5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-5A0A075B6B5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav6-5A0A075B6B5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav6-5A0A075B6B5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-5A0A075B6B5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-5A0A075B6B5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav6-5A0A075B6B5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-5A0A075B6B5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6-5A0A075B6B5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6-5A0A075B6B5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.41■□□□□ 0.22
Trav6-5A0A075B6B5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Gm9812-201ENSMUST00000061934 968 ntBASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-5A0A075B6B5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms