Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6n-6A0A075B6B2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav6n-6A0A075B6B2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav6n-6A0A075B6B2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6n-6A0A075B6B2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6n-6A0A075B6B2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6n-6A0A075B6B2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6n-6A0A075B6B2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6n-6A0A075B6B2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6n-6A0A075B6B2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Trav6n-6A0A075B6B2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6n-6A0A075B6B2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-6A0A075B6B2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-6A0A075B6B2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-6A0A075B6B2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav6n-6A0A075B6B2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.74■□□□□ 0.11
Trav6n-6A0A075B6B2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-6A0A075B6B2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6n-6A0A075B6B2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6n-6A0A075B6B2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6n-6A0A075B6B2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-6A0A075B6B2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-6A0A075B6B2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-6A0A075B6B2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-6A0A075B6B2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-6A0A075B6B2 Gm9806-201ENSMUST00000051080 552 ntBASIC15.72■□□□□ 0.11
Trav6n-6A0A075B6B2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6n-6A0A075B6B2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav6n-6A0A075B6B2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav6n-6A0A075B6B2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav6n-6A0A075B6B2 Gm11687-201ENSMUST00000118911 886 ntBASIC15.71■□□□□ 0.11
Trav6n-6A0A075B6B2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.71■□□□□ 0.11
Trav6n-6A0A075B6B2 Terc-201ENSMUST00000082862 423 ntBASIC15.71■□□□□ 0.11
Trav6n-6A0A075B6B2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6n-6A0A075B6B2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6n-6A0A075B6B2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6n-6A0A075B6B2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6n-6A0A075B6B2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.71■□□□□ 0.1
Trav6n-6A0A075B6B2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6n-6A0A075B6B2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6n-6A0A075B6B2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6n-6A0A075B6B2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Trav6n-6A0A075B6B2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 Scarna2-201ENSMUST00000157560 414 ntBASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trav6n-6A0A075B6B2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-6A0A075B6B2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-6A0A075B6B2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-6A0A075B6B2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-6A0A075B6B2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav6n-6A0A075B6B2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-6A0A075B6B2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav6n-6A0A075B6B2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-6A0A075B6B2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-6A0A075B6B2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6n-6A0A075B6B2 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.69■□□□□ 0.1
Trav6n-6A0A075B6B2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6n-6A0A075B6B2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6n-6A0A075B6B2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav6n-6A0A075B6B2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6n-6A0A075B6B2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav6n-6A0A075B6B2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6n-6A0A075B6B2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6n-6A0A075B6B2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6n-6A0A075B6B2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6n-6A0A075B6B2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6n-6A0A075B6B2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6n-6A0A075B6B2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6n-6A0A075B6B2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6n-6A0A075B6B2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6n-6A0A075B6B2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav6n-6A0A075B6B2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6n-6A0A075B6B2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Trav6n-6A0A075B6B2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6n-6A0A075B6B2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6n-6A0A075B6B2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6n-6A0A075B6B2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6n-6A0A075B6B2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6n-6A0A075B6B2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms