Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-3A0A075B6A4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-3A0A075B6A4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-3A0A075B6A4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-3A0A075B6A4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-3A0A075B6A4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav12d-3A0A075B6A4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav12d-3A0A075B6A4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-3A0A075B6A4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-3A0A075B6A4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav12d-3A0A075B6A4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12d-3A0A075B6A4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Trav12d-3A0A075B6A4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12d-3A0A075B6A4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav12d-3A0A075B6A4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav12d-3A0A075B6A4 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.93■□□□□ 0.14
Trav12d-3A0A075B6A4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12d-3A0A075B6A4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav12d-3A0A075B6A4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-3A0A075B6A4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-3A0A075B6A4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-3A0A075B6A4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-3A0A075B6A4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-3A0A075B6A4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav12d-3A0A075B6A4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-3A0A075B6A4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-3A0A075B6A4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-3A0A075B6A4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-3A0A075B6A4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-3A0A075B6A4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav12d-3A0A075B6A4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-3A0A075B6A4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Gm37136-201ENSMUST00000194368 194 ntBASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.88■□□□□ 0.13
Trav12d-3A0A075B6A4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-3A0A075B6A4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-3A0A075B6A4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.87■□□□□ 0.13
Trav12d-3A0A075B6A4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-3A0A075B6A4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.87■□□□□ 0.13
Trav12d-3A0A075B6A4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-3A0A075B6A4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-3A0A075B6A4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-3A0A075B6A4 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.87■□□□□ 0.13
Trav12d-3A0A075B6A4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav12d-3A0A075B6A4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-3A0A075B6A4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms