Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9d-1A0A075B699 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9d-1A0A075B699 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-1A0A075B699 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.37■□□□□ 0.21
Trav9d-1A0A075B699 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9d-1A0A075B699 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9d-1A0A075B699 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav9d-1A0A075B699 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.37■□□□□ 0.21
Trav9d-1A0A075B699 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9d-1A0A075B699 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9d-1A0A075B699 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9d-1A0A075B699 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9d-1A0A075B699 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav9d-1A0A075B699 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-1A0A075B699 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-1A0A075B699 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-1A0A075B699 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-1A0A075B699 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-1A0A075B699 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-1A0A075B699 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-1A0A075B699 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Trav9d-1A0A075B699 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-1A0A075B699 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
Trav9d-1A0A075B699 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-1A0A075B699 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav9d-1A0A075B699 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-1A0A075B699 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Trav9d-1A0A075B699 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-1A0A075B699 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-1A0A075B699 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-1A0A075B699 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-1A0A075B699 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-1A0A075B699 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav9d-1A0A075B699 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9d-1A0A075B699 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9d-1A0A075B699 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9d-1A0A075B699 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trav9d-1A0A075B699 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9d-1A0A075B699 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trav9d-1A0A075B699 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav9d-1A0A075B699 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav9d-1A0A075B699 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9d-1A0A075B699 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9d-1A0A075B699 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9d-1A0A075B699 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav9d-1A0A075B699 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trav9d-1A0A075B699 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav9d-1A0A075B699 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav9d-1A0A075B699 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.33■□□□□ 0.2
Trav9d-1A0A075B699 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.33■□□□□ 0.2
Trav9d-1A0A075B699 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav9d-1A0A075B699 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9d-1A0A075B699 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9d-1A0A075B699 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9d-1A0A075B699 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
Trav9d-1A0A075B699 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9d-1A0A075B699 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-1A0A075B699 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-1A0A075B699 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-1A0A075B699 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Trav9d-1A0A075B699 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Trav9d-1A0A075B699 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-1A0A075B699 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-1A0A075B699 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav9d-1A0A075B699 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav9d-1A0A075B699 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9d-1A0A075B699 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav9d-1A0A075B699 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-1A0A075B699 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Gm27502-201ENSMUST00000183495 199 ntBASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms