Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav18A0A075B656 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav18A0A075B656 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav18A0A075B656 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav18A0A075B656 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav18A0A075B656 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav18A0A075B656 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trav18A0A075B656 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav18A0A075B656 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav18A0A075B656 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav18A0A075B656 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Trav18A0A075B656 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav18A0A075B656 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav18A0A075B656 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav18A0A075B656 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.4■□□□□ 0.38
Trav18A0A075B656 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav18A0A075B656 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav18A0A075B656 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trav18A0A075B656 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav18A0A075B656 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Trav18A0A075B656 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.4■□□□□ 0.38
Trav18A0A075B656 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav18A0A075B656 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav18A0A075B656 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav18A0A075B656 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav18A0A075B656 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav18A0A075B656 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav18A0A075B656 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav18A0A075B656 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav18A0A075B656 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trav18A0A075B656 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav18A0A075B656 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav18A0A075B656 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav18A0A075B656 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
Trav18A0A075B656 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav18A0A075B656 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trav18A0A075B656 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav18A0A075B656 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav18A0A075B656 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav18A0A075B656 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav18A0A075B656 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav18A0A075B656 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav18A0A075B656 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav18A0A075B656 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav18A0A075B656 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav18A0A075B656 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav18A0A075B656 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav18A0A075B656 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav18A0A075B656 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav18A0A075B656 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav18A0A075B656 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav18A0A075B656 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav18A0A075B656 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav18A0A075B656 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav18A0A075B656 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trav18A0A075B656 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav18A0A075B656 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav18A0A075B656 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav18A0A075B656 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.36■□□□□ 0.37
Trav18A0A075B656 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav18A0A075B656 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav18A0A075B656 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav18A0A075B656 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav18A0A075B656 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav18A0A075B656 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav18A0A075B656 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav18A0A075B656 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav18A0A075B656 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav18A0A075B656 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav18A0A075B656 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav18A0A075B656 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav18A0A075B656 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav18A0A075B656 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav18A0A075B656 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav18A0A075B656 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav18A0A075B656 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav18A0A075B656 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav18A0A075B656 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav18A0A075B656 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav18A0A075B656 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trav18A0A075B656 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav18A0A075B656 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav18A0A075B656 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav18A0A075B656 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav18A0A075B656 Gm27502-201ENSMUST00000183495 199 ntBASIC17.33■□□□□ 0.36
Trav18A0A075B656 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav18A0A075B656 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav18A0A075B656 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav18A0A075B656 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav18A0A075B656 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav18A0A075B656 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav18A0A075B656 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav18A0A075B656 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.32■□□□□ 0.36
Trav18A0A075B656 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav18A0A075B656 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav18A0A075B656 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav18A0A075B656 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav18A0A075B656 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav18A0A075B656 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav18A0A075B656 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms