Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav16A0A075B653 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav16A0A075B653 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav16A0A075B653 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16A0A075B653 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16A0A075B653 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16A0A075B653 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16A0A075B653 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16A0A075B653 Gm6821-201ENSMUST00000107540 542 ntBASIC16.37■□□□□ 0.21
Trav16A0A075B653 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.37■□□□□ 0.21
Trav16A0A075B653 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16A0A075B653 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Trav16A0A075B653 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16A0A075B653 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16A0A075B653 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav16A0A075B653 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav16A0A075B653 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav16A0A075B653 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav16A0A075B653 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trav16A0A075B653 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav16A0A075B653 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav16A0A075B653 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.36■□□□□ 0.21
Trav16A0A075B653 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav16A0A075B653 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav16A0A075B653 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav16A0A075B653 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav16A0A075B653 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav16A0A075B653 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16A0A075B653 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16A0A075B653 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16A0A075B653 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16A0A075B653 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Trav16A0A075B653 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16A0A075B653 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16A0A075B653 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16A0A075B653 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav16A0A075B653 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16A0A075B653 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trav16A0A075B653 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16A0A075B653 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16A0A075B653 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16A0A075B653 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav16A0A075B653 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16A0A075B653 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.34■□□□□ 0.21
Trav16A0A075B653 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16A0A075B653 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav16A0A075B653 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trav16A0A075B653 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav16A0A075B653 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav16A0A075B653 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trav16A0A075B653 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav16A0A075B653 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav16A0A075B653 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav16A0A075B653 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav16A0A075B653 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav16A0A075B653 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav16A0A075B653 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav16A0A075B653 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav16A0A075B653 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav16A0A075B653 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16A0A075B653 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16A0A075B653 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.31■□□□□ 0.2
Trav16A0A075B653 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16A0A075B653 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16A0A075B653 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16A0A075B653 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav16A0A075B653 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav16A0A075B653 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav16A0A075B653 Terc-201ENSMUST00000082862 423 ntBASIC16.3■□□□□ 0.2
Trav16A0A075B653 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav16A0A075B653 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav16A0A075B653 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav16A0A075B653 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav16A0A075B653 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav16A0A075B653 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.29■□□□□ 0.2
Trav16A0A075B653 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav16A0A075B653 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms