Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Trav4-4-dv10A0A075B651 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trav4-4-dv10A0A075B651 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-4-dv10A0A075B651 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.62■□□□□ 0.25
Trav4-4-dv10A0A075B651 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav4-4-dv10A0A075B651 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4-4-dv10A0A075B651 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4-4-dv10A0A075B651 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav4-4-dv10A0A075B651 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.61■□□□□ 0.25
Trav4-4-dv10A0A075B651 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4-4-dv10A0A075B651 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Trav4-4-dv10A0A075B651 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4-4-dv10A0A075B651 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav4-4-dv10A0A075B651 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Trav4-4-dv10A0A075B651 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4-4-dv10A0A075B651 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4-4-dv10A0A075B651 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4-4-dv10A0A075B651 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4-4-dv10A0A075B651 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4-4-dv10A0A075B651 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4-4-dv10A0A075B651 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4-4-dv10A0A075B651 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav4-4-dv10A0A075B651 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4-4-dv10A0A075B651 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4-4-dv10A0A075B651 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4-4-dv10A0A075B651 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4-4-dv10A0A075B651 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav4-4-dv10A0A075B651 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav4-4-dv10A0A075B651 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.58■□□□□ 0.24
Trav4-4-dv10A0A075B651 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trav4-4-dv10A0A075B651 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav4-4-dv10A0A075B651 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.58■□□□□ 0.24
Trav4-4-dv10A0A075B651 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav4-4-dv10A0A075B651 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav4-4-dv10A0A075B651 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav4-4-dv10A0A075B651 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav4-4-dv10A0A075B651 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4-4-dv10A0A075B651 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4-4-dv10A0A075B651 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav4-4-dv10A0A075B651 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4-4-dv10A0A075B651 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4-4-dv10A0A075B651 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4-4-dv10A0A075B651 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav4-4-dv10A0A075B651 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4-4-dv10A0A075B651 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav4-4-dv10A0A075B651 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4-4-dv10A0A075B651 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Trav4-4-dv10A0A075B651 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav4-4-dv10A0A075B651 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav4-4-dv10A0A075B651 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav4-4-dv10A0A075B651 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav4-4-dv10A0A075B651 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav4-4-dv10A0A075B651 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav4-4-dv10A0A075B651 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav4-4-dv10A0A075B651 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav4-4-dv10A0A075B651 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4-4-dv10A0A075B651 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav4-4-dv10A0A075B651 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav4-4-dv10A0A075B651 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav4-4-dv10A0A075B651 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav4-4-dv10A0A075B651 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav4-4-dv10A0A075B651 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.54■□□□□ 0.24
Trav4-4-dv10A0A075B651 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.54■□□□□ 0.24
Trav4-4-dv10A0A075B651 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav4-4-dv10A0A075B651 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav4-4-dv10A0A075B651 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav4-4-dv10A0A075B651 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.53■□□□□ 0.24
Trav4-4-dv10A0A075B651 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.53■□□□□ 0.24
Trav4-4-dv10A0A075B651 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav4-4-dv10A0A075B651 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav4-4-dv10A0A075B651 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav4-4-dv10A0A075B651 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trav4-4-dv10A0A075B651 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trav4-4-dv10A0A075B651 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav4-4-dv10A0A075B651 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav4-4-dv10A0A075B651 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav4-4-dv10A0A075B651 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav4-4-dv10A0A075B651 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav4-4-dv10A0A075B651 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav4-4-dv10A0A075B651 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav4-4-dv10A0A075B651 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav4-4-dv10A0A075B651 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav4-4-dv10A0A075B651 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav4-4-dv10A0A075B651 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav4-4-dv10A0A075B651 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav4-4-dv10A0A075B651 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms