Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.07■□□□□ 0.16
Trav14n-3A0A075B645 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav14n-3A0A075B645 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav14n-3A0A075B645 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav14n-3A0A075B645 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav14n-3A0A075B645 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav14n-3A0A075B645 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav14n-3A0A075B645 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav14n-3A0A075B645 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav14n-3A0A075B645 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav14n-3A0A075B645 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav14n-3A0A075B645 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav14n-3A0A075B645 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav14n-3A0A075B645 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav14n-3A0A075B645 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav14n-3A0A075B645 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trav14n-3A0A075B645 Nkain2-201ENSMUST00000092602 558 ntBASIC16.03■□□□□ 0.16
Trav14n-3A0A075B645 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav14n-3A0A075B645 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav14n-3A0A075B645 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav14n-3A0A075B645 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav14n-3A0A075B645 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Trav14n-3A0A075B645 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav14n-3A0A075B645 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav14n-3A0A075B645 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trav14n-3A0A075B645 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.01■□□□□ 0.15
Trav14n-3A0A075B645 Gm34220-201ENSMUST00000223001 2709 ntBASIC16■□□□□ 0.15
Trav14n-3A0A075B645 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav14n-3A0A075B645 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav14n-3A0A075B645 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.99■□□□□ 0.15
Trav14n-3A0A075B645 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav14n-3A0A075B645 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Trav14n-3A0A075B645 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav14n-3A0A075B645 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav14n-3A0A075B645 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav14n-3A0A075B645 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav14n-3A0A075B645 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav14n-3A0A075B645 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav14n-3A0A075B645 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav14n-3A0A075B645 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav14n-3A0A075B645 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Trav14n-3A0A075B645 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav14n-3A0A075B645 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav14n-3A0A075B645 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav14n-3A0A075B645 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav14n-3A0A075B645 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav14n-3A0A075B645 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav14n-3A0A075B645 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav14n-3A0A075B645 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav14n-3A0A075B645 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav14n-3A0A075B645 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav14n-3A0A075B645 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav14n-3A0A075B645 Iqck-206ENSMUST00000208658 2891 ntBASIC15.97■□□□□ 0.15
Trav14n-3A0A075B645 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav14n-3A0A075B645 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav14n-3A0A075B645 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav14n-3A0A075B645 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav14n-3A0A075B645 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Trav14n-3A0A075B645 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav14n-3A0A075B645 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav14n-3A0A075B645 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.96■□□□□ 0.15
Trav14n-3A0A075B645 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav14n-3A0A075B645 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav14n-3A0A075B645 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms