Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8-1A0A075B641 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8-1A0A075B641 Tdp2-203ENSMUST00000223804 1136 ntBASIC15.21■□□□□ 0.03
Trav8-1A0A075B641 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8-1A0A075B641 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8-1A0A075B641 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trav8-1A0A075B641 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8-1A0A075B641 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.2■□□□□ 0.02
Trav8-1A0A075B641 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8-1A0A075B641 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8-1A0A075B641 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8-1A0A075B641 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8-1A0A075B641 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8-1A0A075B641 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8-1A0A075B641 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav8-1A0A075B641 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav8-1A0A075B641 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.18■□□□□ 0.02
Trav8-1A0A075B641 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8-1A0A075B641 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8-1A0A075B641 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8-1A0A075B641 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav8-1A0A075B641 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8-1A0A075B641 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8-1A0A075B641 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8-1A0A075B641 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Trav8-1A0A075B641 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8-1A0A075B641 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8-1A0A075B641 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8-1A0A075B641 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8-1A0A075B641 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8-1A0A075B641 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav8-1A0A075B641 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8-1A0A075B641 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8-1A0A075B641 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav8-1A0A075B641 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8-1A0A075B641 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8-1A0A075B641 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav8-1A0A075B641 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8-1A0A075B641 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8-1A0A075B641 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8-1A0A075B641 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8-1A0A075B641 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Trav8-1A0A075B641 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav8-1A0A075B641 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav8-1A0A075B641 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav8-1A0A075B641 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8-1A0A075B641 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC15.13■□□□□ 0.01
Trav8-1A0A075B641 Gm45855-201ENSMUST00000212546 880 ntBASIC15.13■□□□□ 0.01
Trav8-1A0A075B641 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav8-1A0A075B641 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav8-1A0A075B641 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trav8-1A0A075B641 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8-1A0A075B641 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav8-1A0A075B641 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.11■□□□□ 0.01
Trav8-1A0A075B641 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav8-1A0A075B641 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8-1A0A075B641 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.11■□□□□ 0.01
Trav8-1A0A075B641 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8-1A0A075B641 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav8-1A0A075B641 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8-1A0A075B641 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8-1A0A075B641 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8-1A0A075B641 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.1■□□□□ 0.01
Trav8-1A0A075B641 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms