Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav6-7-dv9A0A075B639 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trav6-7-dv9A0A075B639 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trav6-7-dv9A0A075B639 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-7-dv9A0A075B639 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-7-dv9A0A075B639 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.91■□□□□ 0.62
Trav6-7-dv9A0A075B639 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.91■□□□□ 0.62
Trav6-7-dv9A0A075B639 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.91■□□□□ 0.62
Trav6-7-dv9A0A075B639 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trav6-7-dv9A0A075B639 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav6-7-dv9A0A075B639 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-7-dv9A0A075B639 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-7-dv9A0A075B639 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-7-dv9A0A075B639 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-7-dv9A0A075B639 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-7-dv9A0A075B639 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-7-dv9A0A075B639 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-7-dv9A0A075B639 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav6-7-dv9A0A075B639 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6-7-dv9A0A075B639 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.89■□□□□ 0.61
Trav6-7-dv9A0A075B639 Gm12366-201ENSMUST00000121722 873 ntBASIC18.89■□□□□ 0.61
Trav6-7-dv9A0A075B639 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.89■□□□□ 0.61
Trav6-7-dv9A0A075B639 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6-7-dv9A0A075B639 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.89■□□□□ 0.61
Trav6-7-dv9A0A075B639 Gm5786-201ENSMUST00000085368 882 ntBASIC18.89■□□□□ 0.61
Trav6-7-dv9A0A075B639 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6-7-dv9A0A075B639 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav6-7-dv9A0A075B639 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.89■□□□□ 0.61
Trav6-7-dv9A0A075B639 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.88■□□□□ 0.61
Trav6-7-dv9A0A075B639 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.88■□□□□ 0.61
Trav6-7-dv9A0A075B639 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-7-dv9A0A075B639 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.88■□□□□ 0.61
Trav6-7-dv9A0A075B639 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trav6-7-dv9A0A075B639 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-7-dv9A0A075B639 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-7-dv9A0A075B639 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-7-dv9A0A075B639 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-7-dv9A0A075B639 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav6-7-dv9A0A075B639 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav6-7-dv9A0A075B639 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Trav6-7-dv9A0A075B639 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trav6-7-dv9A0A075B639 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav6-7-dv9A0A075B639 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-7-dv9A0A075B639 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-7-dv9A0A075B639 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-7-dv9A0A075B639 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav6-7-dv9A0A075B639 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-7-dv9A0A075B639 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav6-7-dv9A0A075B639 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.85■□□□□ 0.61
Trav6-7-dv9A0A075B639 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-7-dv9A0A075B639 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-7-dv9A0A075B639 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.85■□□□□ 0.61
Trav6-7-dv9A0A075B639 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav6-7-dv9A0A075B639 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-7-dv9A0A075B639 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-7-dv9A0A075B639 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav6-7-dv9A0A075B639 Gm10420-201ENSMUST00000121713 882 ntBASIC18.84■□□□□ 0.61
Trav6-7-dv9A0A075B639 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-7-dv9A0A075B639 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trav6-7-dv9A0A075B639 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav6-7-dv9A0A075B639 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav6-7-dv9A0A075B639 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav6-7-dv9A0A075B639 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6-7-dv9A0A075B639 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.83■□□□□ 0.6
Trav6-7-dv9A0A075B639 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6-7-dv9A0A075B639 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-7-dv9A0A075B639 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.81■□□□□ 0.6
Trav6-7-dv9A0A075B639 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms