Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.1■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Trav15d-1-dv6d-1A0A075B624 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.07■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Gm44428-201ENSMUST00000204474 874 ntBASIC18.06■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.04■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav15d-1-dv6d-1A0A075B624 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.01■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.98■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.98■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-1-dv6d-1A0A075B624 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 127.8 ms