Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Gm25927-201ENSMUST00000175058 117 ntBASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.9□□□□□ -0.5
H2afb3S4R1G7 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb3S4R1G7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
H2afb3S4R1G7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
H2afb3S4R1G7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
H2afb3S4R1G7 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.9□□□□□ -0.51
H2afb3S4R1G7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
H2afb3S4R1G7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
H2afb3S4R1G7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.89□□□□□ -0.51
H2afb3S4R1G7 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms