Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Gm11524-201ENSMUST00000119349 807 ntBASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trim3Q9R1R2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Gm18307-201ENSMUST00000206864 949 ntBASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim3Q9R1R2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Gm12138-201ENSMUST00000122180 951 ntBASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Gm45384-201ENSMUST00000210451 277 ntBASIC12.43□□□□□ -0.42
Trim3Q9R1R2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim3Q9R1R2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms