Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn2Q9R0A1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Gm5354-201ENSMUST00000182417 973 ntBASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Gm45668-201ENSMUST00000211271 493 ntBASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn2Q9R0A1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clcn2Q9R0A1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn2Q9R0A1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn2Q9R0A1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn2Q9R0A1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.49□□□□□ -0.25
Clcn2Q9R0A1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn2Q9R0A1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Clcn2Q9R0A1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn2Q9R0A1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn2Q9R0A1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Clcn2Q9R0A1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn2Q9R0A1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clcn2Q9R0A1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms