Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rtp4Q9ER80 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rtp4Q9ER80 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rtp4Q9ER80 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rtp4Q9ER80 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.39□□□□□ -0.43
Rtp4Q9ER80 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rtp4Q9ER80 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Gm38223-201ENSMUST00000194484 695 ntBASIC12.38□□□□□ -0.43
Rtp4Q9ER80 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Gm6091-201ENSMUST00000098307 165 ntBASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rtp4Q9ER80 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Gm27847-201ENSMUST00000183711 107 ntBASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Gm27375-201ENSMUST00000183799 107 ntBASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Gm38671-201ENSMUST00000200573 130 ntBASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rtp4Q9ER80 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rtp4Q9ER80 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms