Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Gm13392-201ENSMUST00000117708 150 ntBASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Gm12363-201ENSMUST00000122250 668 ntBASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Gm27514-201ENSMUST00000183692 110 ntBASIC12.12□□□□□ -0.47
Rita1Q9D1H0 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rita1Q9D1H0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Gm12742-201ENSMUST00000117326 410 ntBASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Gm26927-201ENSMUST00000182385 965 ntBASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Gm43630-201ENSMUST00000201550 776 ntBASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rita1Q9D1H0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms