Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Ssbp3Q9D032 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ssbp3Q9D032 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ssbp3Q9D032 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ssbp3Q9D032 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.02□□□□□ -0.64
Ssbp3Q9D032 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ssbp3Q9D032 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ssbp3Q9D032 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Gm6091-201ENSMUST00000098307 165 ntBASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ssbp3Q9D032 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Gm24644-201ENSMUST00000157114 139 ntBASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Gm7561-201ENSMUST00000211203 886 ntBASIC11.01□□□□□ -0.65
Ssbp3Q9D032 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.01□□□□□ -0.65
Ssbp3Q9D032 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ssbp3Q9D032 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ssbp3Q9D032 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ssbp3Q9D032 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11□□□□□ -0.65
Ssbp3Q9D032 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ssbp3Q9D032 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ssbp3Q9D032 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ssbp3Q9D032 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ssbp3Q9D032 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ssbp3Q9D032 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ssbp3Q9D032 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ssbp3Q9D032 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ssbp3Q9D032 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms