Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm13689-201ENSMUST00000119360 685 ntBASIC13.15□□□□□ -0.3
Trim33Q99PP7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Gm7063-201ENSMUST00000186840 981 ntBASIC13.15□□□□□ -0.3
Trim33Q99PP7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim33Q99PP7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim33Q99PP7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.15□□□□□ -0.3
Trim33Q99PP7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC13.15□□□□□ -0.3
Trim33Q99PP7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.15□□□□□ -0.3
Trim33Q99PP7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim33Q99PP7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim33Q99PP7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim33Q99PP7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Gm29608-201ENSMUST00000190444 463 ntBASIC13.14□□□□□ -0.31
Trim33Q99PP7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Gm6745-201ENSMUST00000199216 526 ntBASIC13.14□□□□□ -0.31
Trim33Q99PP7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim33Q99PP7 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.14□□□□□ -0.31
Trim33Q99PP7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim33Q99PP7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.13□□□□□ -0.31
Trim33Q99PP7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Gm38223-201ENSMUST00000194484 695 ntBASIC13.13□□□□□ -0.31
Trim33Q99PP7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.13□□□□□ -0.31
Trim33Q99PP7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.13□□□□□ -0.31
Trim33Q99PP7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim33Q99PP7 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms