Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Gm15770-201ENSMUST00000117498 584 ntBASIC13.04□□□□□ -0.32
Vsx1Q91V10 Gm4909-201ENSMUST00000118749 794 ntBASIC13.04□□□□□ -0.32
Vsx1Q91V10 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.04□□□□□ -0.32
Vsx1Q91V10 Gm16372-201ENSMUST00000073088 450 ntBASIC13.04□□□□□ -0.32
Vsx1Q91V10 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.04□□□□□ -0.32
Vsx1Q91V10 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.04□□□□□ -0.32
Vsx1Q91V10 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vsx1Q91V10 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Gm11439-201ENSMUST00000118598 409 ntBASIC13.03□□□□□ -0.32
Vsx1Q91V10 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.03□□□□□ -0.32
Vsx1Q91V10 Gm12566-201ENSMUST00000121479 359 ntBASIC13.03□□□□□ -0.32
Vsx1Q91V10 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.03□□□□□ -0.32
Vsx1Q91V10 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.03□□□□□ -0.32
Vsx1Q91V10 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vsx1Q91V10 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx1Q91V10 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx1Q91V10 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx1Q91V10 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx1Q91V10 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vsx1Q91V10 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms