Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Gm9719-201ENSMUST00000162765 543 ntBASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Gm10253-201ENSMUST00000194270 940 ntBASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Gm44608-201ENSMUST00000206827 855 ntBASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.34□□□□□ -0.27
Slf1Q8R3P9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slf1Q8R3P9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slf1Q8R3P9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Gm5566-201ENSMUST00000116118 459 ntBASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Gm5312-201ENSMUST00000203728 547 ntBASIC13.33□□□□□ -0.28
Slf1Q8R3P9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slf1Q8R3P9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Gm43575-201ENSMUST00000196420 516 ntBASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Gm7774-201ENSMUST00000200064 533 ntBASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.32□□□□□ -0.28
Slf1Q8R3P9 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.32□□□□□ -0.28
Slf1Q8R3P9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms