Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Gm27622-201ENSMUST00000183779 60 ntBASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Gm27533-201ENSMUST00000183800 152 ntBASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Gm10253-201ENSMUST00000194270 940 ntBASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd3Q8R1N4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Gm27741-201ENSMUST00000185060 237 ntBASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Gm8000-201ENSMUST00000188378 592 ntBASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd3Q8R1N4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Gm4995-201ENSMUST00000117247 432 ntBASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd3Q8R1N4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.16□□□□□ -0.3
Nudcd3Q8R1N4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms