Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Gm38092-201ENSMUST00000195600 653 ntBASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ddx54Q8K4L0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Gm10051-201ENSMUST00000145209 414 ntBASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Gm6963-201ENSMUST00000147879 379 ntBASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Gm38297-201ENSMUST00000195122 1057 ntBASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 AC166992.1-201ENSMUST00000216356 565 ntBASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Gm45925-201ENSMUST00000218882 744 ntBASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ddx54Q8K4L0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Gm2673-201ENSMUST00000120958 1608 ntBASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ddx54Q8K4L0 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Gm12134-201ENSMUST00000122109 520 ntBASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ddx54Q8K4L0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms