Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 CT025626.1-201ENSMUST00000223735 1455 ntBASIC8.32□□□□□ -1.08
Cystm1Q8K353 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cystm1Q8K353 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cystm1Q8K353 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cystm1Q8K353 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Cystm1Q8K353 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cystm1Q8K353 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Cystm1Q8K353 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cystm1Q8K353 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cystm1Q8K353 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gm44851-201ENSMUST00000205735 2309 ntBASIC8.31□□□□□ -1.08
Cystm1Q8K353 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gm44292-201ENSMUST00000205194 2364 ntBASIC8.31□□□□□ -1.08
Cystm1Q8K353 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gm6539-201ENSMUST00000119157 1064 ntBASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gm14042-201ENSMUST00000120139 833 ntBASIC8.31□□□□□ -1.08
Cystm1Q8K353 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gm44913-201ENSMUST00000208060 2990 ntBASIC8.31□□□□□ -1.08
Cystm1Q8K353 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC8.31□□□□□ -1.08
Cystm1Q8K353 AC139382.1-201ENSMUST00000221402 498 ntBASIC8.31□□□□□ -1.08
Cystm1Q8K353 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 AC131743.5-201ENSMUST00000220775 1618 ntBASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gm36957-201ENSMUST00000192982 2824 ntBASIC8.31□□□□□ -1.08
Cystm1Q8K353 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gm43984-201ENSMUST00000204572 2864 ntBASIC8.31□□□□□ -1.08
Cystm1Q8K353 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cystm1Q8K353 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Gm44758-201ENSMUST00000206096 2068 ntBASIC8.3□□□□□ -1.08
Cystm1Q8K353 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC8.3□□□□□ -1.08
Cystm1Q8K353 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms