Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim35Q8C006 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Celf4-206ENSMUST00000224553 1729 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim35Q8C006 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Paip1-202ENSMUST00000109203 1525 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Trim35Q8C006 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim35Q8C006 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim35Q8C006 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim35Q8C006 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim35Q8C006 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim35Q8C006 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Trim35Q8C006 Gm14065-201ENSMUST00000120848 585 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Trim35Q8C006 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim35Q8C006 Gm44392-201ENSMUST00000196758 115 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 Gm43767-201ENSMUST00000198933 381 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 Gm18057-201ENSMUST00000208220 503 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim35Q8C006 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Platr25-208ENSMUST00000222602 939 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.46□□□□□ -0.09
Trim35Q8C006 AC121542.1-201ENSMUST00000227245 721 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trim35Q8C006 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 Gm23448-201ENSMUST00000083151 104 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.46□□□□□ -0.09
Trim35Q8C006 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim35Q8C006 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.46□□□□□ -0.1
Trim35Q8C006 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim35Q8C006 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trim35Q8C006 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim35Q8C006 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim35Q8C006 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim35Q8C006 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim35Q8C006 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.46□□□□□ -0.1
Trim35Q8C006 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim35Q8C006 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim35Q8C006 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Trim35Q8C006 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm23426-201ENSMUST00000122483 318 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm18889-201ENSMUST00000174284 929 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm2058-201ENSMUST00000178791 560 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm29576-201ENSMUST00000188020 678 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm28354-201ENSMUST00000190904 678 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm8920-201ENSMUST00000196153 924 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm44673-201ENSMUST00000205692 996 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm44688-201ENSMUST00000209083 537 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm5178-201ENSMUST00000219380 898 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 AC163296.1-201ENSMUST00000220004 1266 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 AC121960.3-201ENSMUST00000227077 623 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 AC154419.1-201ENSMUST00000227627 272 ntBASIC14.45□□□□□ -0.1
Trim35Q8C006 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Dlx5-201ENSMUST00000052609 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim35Q8C006 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.45□□□□□ -0.1
Trim35Q8C006 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim35Q8C006 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms