Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Gm16202-201ENSMUST00000117532 544 ntBASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Mir8109-201ENSMUST00000184375 117 ntBASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp1Q8BJQ2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp1Q8BJQ2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Gm44364-201ENSMUST00000198368 141 ntBASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp1Q8BJQ2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp1Q8BJQ2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Usp1Q8BJQ2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp1Q8BJQ2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp1Q8BJQ2 Gm13342-201ENSMUST00000121055 207 ntBASIC14.02□□□□□ -0.17
Usp1Q8BJQ2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms