Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC15.3■□□□□ 0.04
Nup98Q6PFD9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm7857-201ENSMUST00000117957 358 ntBASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm6963-201ENSMUST00000147879 379 ntBASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm8385-201ENSMUST00000058999 643 ntBASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm24749-201ENSMUST00000157838 343 ntBASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm44262-201ENSMUST00000204969 372 ntBASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Nup98Q6PFD9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Gm23200-201ENSMUST00000104379 132 ntBASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Gm12314-201ENSMUST00000118104 538 ntBASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Gm9083-201ENSMUST00000120423 819 ntBASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Gm45925-201ENSMUST00000218882 744 ntBASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nup98Q6PFD9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Gm12217-201ENSMUST00000118858 696 ntBASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nup98Q6PFD9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms