Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sdc3Q64519 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.73□□□□□ -0.37
Sdc3Q64519 Gm26315-201ENSMUST00000083890 321 ntBASIC12.73□□□□□ -0.37
Sdc3Q64519 Gm6091-201ENSMUST00000098307 165 ntBASIC12.73□□□□□ -0.37
Sdc3Q64519 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sdc3Q64519 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sdc3Q64519 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sdc3Q64519 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Sdc3Q64519 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sdc3Q64519 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.72□□□□□ -0.37
Sdc3Q64519 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sdc3Q64519 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.72□□□□□ -0.37
Sdc3Q64519 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sdc3Q64519 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.72□□□□□ -0.37
Sdc3Q64519 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Sdc3Q64519 Gm13612-201ENSMUST00000119276 390 ntBASIC12.72□□□□□ -0.37
Sdc3Q64519 Gm6152-201ENSMUST00000151704 340 ntBASIC12.72□□□□□ -0.37
Sdc3Q64519 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.72□□□□□ -0.37
Sdc3Q64519 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.72□□□□□ -0.37
Sdc3Q64519 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Gm27847-201ENSMUST00000183711 107 ntBASIC12.72□□□□□ -0.37
Sdc3Q64519 Gm27375-201ENSMUST00000183799 107 ntBASIC12.72□□□□□ -0.37
Sdc3Q64519 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.72□□□□□ -0.37
Sdc3Q64519 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.72□□□□□ -0.37
Sdc3Q64519 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sdc3Q64519 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sdc3Q64519 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Sdc3Q64519 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.72□□□□□ -0.37
Sdc3Q64519 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sdc3Q64519 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.71□□□□□ -0.37
Sdc3Q64519 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sdc3Q64519 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.71□□□□□ -0.37
Sdc3Q64519 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.71□□□□□ -0.37
Sdc3Q64519 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Sdc3Q64519 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Sdc3Q64519 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.71□□□□□ -0.37
Sdc3Q64519 Gm11814-201ENSMUST00000119515 929 ntBASIC12.71□□□□□ -0.37
Sdc3Q64519 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.71□□□□□ -0.37
Sdc3Q64519 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.71□□□□□ -0.37
Sdc3Q64519 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.71□□□□□ -0.37
Sdc3Q64519 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.71□□□□□ -0.37
Sdc3Q64519 Gm8598-201ENSMUST00000221184 836 ntBASIC12.71□□□□□ -0.37
Sdc3Q64519 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
Sdc3Q64519 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sdc3Q64519 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.71□□□□□ -0.38
Sdc3Q64519 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc3Q64519 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc3Q64519 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc3Q64519 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc3Q64519 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc3Q64519 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Sdc3Q64519 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sdc3Q64519 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.7□□□□□ -0.38
Sdc3Q64519 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms