Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm21811-201ENSMUST00000096485 930 ntBASIC14.46□□□□□ -0.09
Col11a1Q61245 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Col11a1Q61245 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col11a1Q61245 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col11a1Q61245 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Col11a1Q61245 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col11a1Q61245 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col11a1Q61245 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col11a1Q61245 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col11a1Q61245 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col11a1Q61245 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm7851-201ENSMUST00000117574 323 ntBASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm12501-201ENSMUST00000119163 529 ntBASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm8199-201ENSMUST00000121323 823 ntBASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm14460-201ENSMUST00000121511 639 ntBASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm45550-201ENSMUST00000209380 946 ntBASIC14.45□□□□□ -0.1
Col11a1Q61245 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm14921-201ENSMUST00000118643 908 ntBASIC14.45□□□□□ -0.1
Col11a1Q61245 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col11a1Q61245 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm37246-201ENSMUST00000192665 835 ntBASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm18038-201ENSMUST00000197900 485 ntBASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm270-201ENSMUST00000223010 976 ntBASIC14.45□□□□□ -0.1
Col11a1Q61245 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col11a1Q61245 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col11a1Q61245 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col11a1Q61245 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Col11a1Q61245 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.44□□□□□ -0.1
Col11a1Q61245 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.44□□□□□ -0.1
Col11a1Q61245 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col11a1Q61245 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.44□□□□□ -0.1
Col11a1Q61245 Gm25517-201ENSMUST00000083865 134 ntBASIC14.44□□□□□ -0.1
Col11a1Q61245 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col11a1Q61245 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.44□□□□□ -0.1
Col11a1Q61245 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col11a1Q61245 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.44□□□□□ -0.1
Col11a1Q61245 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col11a1Q61245 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.43□□□□□ -0.1
Col11a1Q61245 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.43□□□□□ -0.1
Col11a1Q61245 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.43□□□□□ -0.1
Col11a1Q61245 Gm25881-201ENSMUST00000157783 103 ntBASIC14.43□□□□□ -0.1
Col11a1Q61245 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.43□□□□□ -0.1
Col11a1Q61245 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC14.43□□□□□ -0.1
Col11a1Q61245 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.43□□□□□ -0.1
Col11a1Q61245 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Gm9996-201ENSMUST00000070359 913 ntBASIC14.43□□□□□ -0.1
Col11a1Q61245 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col11a1Q61245 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms