Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Vps54Q5SPW0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Gm23931-201ENSMUST00000103842 109 ntBASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 AY702102-202ENSMUST00000194651 1173 ntBASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps54Q5SPW0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Gm12384-201ENSMUST00000119228 919 ntBASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.81■□□□□ 0.12
Vps54Q5SPW0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.81■□□□□ 0.12
Vps54Q5SPW0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.81■□□□□ 0.12
Vps54Q5SPW0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Gm10268-201ENSMUST00000085340 555 ntBASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Vps54Q5SPW0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms