Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Gm15653-201ENSMUST00000119247 907 ntBASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Gm15393-201ENSMUST00000120499 219 ntBASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Gm44771-201ENSMUST00000206975 626 ntBASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Gm10175-201ENSMUST00000086013 645 ntBASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.37□□□□□ -0.27
Cnga4Q3UW12 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.37□□□□□ -0.27
Cnga4Q3UW12 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Mir1897-201ENSMUST00000122581 272 ntBASIC13.36□□□□□ -0.27
Cnga4Q3UW12 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Gm10766-202ENSMUST00000194123 606 ntBASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Gm19931-201ENSMUST00000198920 368 ntBASIC13.36□□□□□ -0.27
Cnga4Q3UW12 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cnga4Q3UW12 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.36□□□□□ -0.27
Cnga4Q3UW12 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Gm13365-201ENSMUST00000121188 973 ntBASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Mir1895-201ENSMUST00000122615 79 ntBASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Gm9229-201ENSMUST00000222777 126 ntBASIC13.35□□□□□ -0.27
Cnga4Q3UW12 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms