Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.22□□□□□ -0.29
Fam196aQ3USH1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fam196aQ3USH1 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.22□□□□□ -0.29
Fam196aQ3USH1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.22□□□□□ -0.29
Fam196aQ3USH1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Fam196aQ3USH1 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.22□□□□□ -0.29
Fam196aQ3USH1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Fam196aQ3USH1 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.22□□□□□ -0.29
Fam196aQ3USH1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Fam196aQ3USH1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Gm24749-201ENSMUST00000157838 343 ntBASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Gm18734-201ENSMUST00000172937 808 ntBASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.21□□□□□ -0.29
Fam196aQ3USH1 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.21□□□□□ -0.29
Fam196aQ3USH1 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.21□□□□□ -0.29
Fam196aQ3USH1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.21□□□□□ -0.3
Fam196aQ3USH1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Gm12134-201ENSMUST00000122109 520 ntBASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Gm9555-201ENSMUST00000200908 583 ntBASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Gm7600-201ENSMUST00000209657 785 ntBASIC13.2□□□□□ -0.3
Fam196aQ3USH1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.2□□□□□ -0.3
Fam196aQ3USH1 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Gm13888-201ENSMUST00000119148 422 ntBASIC13.19□□□□□ -0.3
Fam196aQ3USH1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Gm25043-201ENSMUST00000158604 212 ntBASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.19□□□□□ -0.3
Fam196aQ3USH1 Gm7003-201ENSMUST00000195089 312 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms