Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Gm8492-201ENSMUST00000182375 987 ntBASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Gm19087-201ENSMUST00000191430 946 ntBASIC16.2■□□□□ 0.18
Vars2Q3U2A8 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vars2Q3U2A8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Gm7851-201ENSMUST00000117574 323 ntBASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Gm34023-201ENSMUST00000195539 217 ntBASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 CT485607.1-201ENSMUST00000216100 85 ntBASIC16.19■□□□□ 0.18
Vars2Q3U2A8 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 CT009713.8-201ENSMUST00000225448 560 ntBASIC16.19■□□□□ 0.18
Vars2Q3U2A8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Gm10076-201ENSMUST00000073238 384 ntBASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vars2Q3U2A8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Gm37246-201ENSMUST00000192665 835 ntBASIC16.18■□□□□ 0.18
Vars2Q3U2A8 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Gm19166-201ENSMUST00000196041 1063 ntBASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 AC154176.1-201ENSMUST00000225897 220 ntBASIC16.18■□□□□ 0.18
Vars2Q3U2A8 CT030637.1-201ENSMUST00000228016 669 ntBASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vars2Q3U2A8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.17■□□□□ 0.18
Vars2Q3U2A8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vars2Q3U2A8 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vars2Q3U2A8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms