Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cntn3Q07409 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cntn3Q07409 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cntn3Q07409 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.83□□□□□ -0.2
Cntn3Q07409 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Cntn3Q07409 Gm8062-201ENSMUST00000139696 444 ntBASIC13.83□□□□□ -0.2
Cntn3Q07409 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.83□□□□□ -0.2
Cntn3Q07409 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.83□□□□□ -0.2
Cntn3Q07409 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.83□□□□□ -0.2
Cntn3Q07409 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Cntn3Q07409 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.83□□□□□ -0.2
Cntn3Q07409 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn3Q07409 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Cntn3Q07409 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cntn3Q07409 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cntn3Q07409 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Gm11618-201ENSMUST00000117946 267 ntBASIC13.82□□□□□ -0.2
Cntn3Q07409 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.82□□□□□ -0.2
Cntn3Q07409 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.82□□□□□ -0.2
Cntn3Q07409 Gm37922-201ENSMUST00000195596 455 ntBASIC13.82□□□□□ -0.2
Cntn3Q07409 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.82□□□□□ -0.2
Cntn3Q07409 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.82□□□□□ -0.2
Cntn3Q07409 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cntn3Q07409 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.82□□□□□ -0.2
Cntn3Q07409 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn3Q07409 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cntn3Q07409 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.81□□□□□ -0.2
Cntn3Q07409 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cntn3Q07409 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.81□□□□□ -0.2
Cntn3Q07409 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Cntn3Q07409 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cntn3Q07409 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.81□□□□□ -0.2
Cntn3Q07409 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
Cntn3Q07409 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Gm13392-201ENSMUST00000117708 150 ntBASIC13.81□□□□□ -0.2
Cntn3Q07409 Gm6447-201ENSMUST00000118905 835 ntBASIC13.81□□□□□ -0.2
Cntn3Q07409 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.81□□□□□ -0.2
Cntn3Q07409 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.81□□□□□ -0.2
Cntn3Q07409 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.81□□□□□ -0.2
Cntn3Q07409 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.81□□□□□ -0.2
Cntn3Q07409 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.81□□□□□ -0.2
Cntn3Q07409 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cntn3Q07409 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cntn3Q07409 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cntn3Q07409 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn3Q07409 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms