Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox4Q06831 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox4Q06831 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sox4Q06831 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Sox4Q06831 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.99□□□□□ -0.33
Sox4Q06831 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox4Q06831 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox4Q06831 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.98□□□□□ -0.33
Sox4Q06831 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.98□□□□□ -0.33
Sox4Q06831 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox4Q06831 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.98□□□□□ -0.33
Sox4Q06831 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Gm27331-201ENSMUST00000183705 60 ntBASIC12.98□□□□□ -0.33
Sox4Q06831 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.98□□□□□ -0.33
Sox4Q06831 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.98□□□□□ -0.33
Sox4Q06831 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox4Q06831 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.98□□□□□ -0.33
Sox4Q06831 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox4Q06831 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox4Q06831 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox4Q06831 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox4Q06831 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.98□□□□□ -0.33
Sox4Q06831 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox4Q06831 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sox4Q06831 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Sox4Q06831 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.97□□□□□ -0.33
Sox4Q06831 Gm11425-201ENSMUST00000119608 498 ntBASIC12.97□□□□□ -0.33
Sox4Q06831 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.97□□□□□ -0.33
Sox4Q06831 Gm29127-201ENSMUST00000188304 517 ntBASIC12.97□□□□□ -0.33
Sox4Q06831 Gm29705-201ENSMUST00000212598 474 ntBASIC12.97□□□□□ -0.33
Sox4Q06831 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Gm9396-201ENSMUST00000076703 567 ntBASIC12.97□□□□□ -0.33
Sox4Q06831 Gm25857-201ENSMUST00000082788 129 ntBASIC12.97□□□□□ -0.33
Sox4Q06831 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox4Q06831 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms