Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.29□□□□□ -0.28
Pfdn6Q03958 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.29□□□□□ -0.28
Pfdn6Q03958 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.29□□□□□ -0.28
Pfdn6Q03958 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.29□□□□□ -0.28
Pfdn6Q03958 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pfdn6Q03958 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.28□□□□□ -0.28
Pfdn6Q03958 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.28□□□□□ -0.28
Pfdn6Q03958 Gm28631-201ENSMUST00000190740 334 ntBASIC13.28□□□□□ -0.28
Pfdn6Q03958 Gm10576-201ENSMUST00000191927 825 ntBASIC13.28□□□□□ -0.28
Pfdn6Q03958 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Gm44855-201ENSMUST00000205725 362 ntBASIC13.28□□□□□ -0.28
Pfdn6Q03958 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.28□□□□□ -0.28
Pfdn6Q03958 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.28□□□□□ -0.28
Pfdn6Q03958 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Syt7-205ENSMUST00000224135 1557 ntBASIC13.28□□□□□ -0.28
Pfdn6Q03958 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pfdn6Q03958 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pfdn6Q03958 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pfdn6Q03958 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pfdn6Q03958 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pfdn6Q03958 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pfdn6Q03958 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pfdn6Q03958 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pfdn6Q03958 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pfdn6Q03958 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pfdn6Q03958 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pfdn6Q03958 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pfdn6Q03958 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.27□□□□□ -0.28
Pfdn6Q03958 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.27□□□□□ -0.29
Pfdn6Q03958 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.27□□□□□ -0.29
Pfdn6Q03958 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pfdn6Q03958 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pfdn6Q03958 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms