Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Npas1P97459 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Npas1P97459 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.07□□□□□ -0.64
Npas1P97459 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.07□□□□□ -0.64
Npas1P97459 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Npas1P97459 Gm13015-201ENSMUST00000118674 204 ntBASIC11.07□□□□□ -0.64
Npas1P97459 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.07□□□□□ -0.64
Npas1P97459 Gm11745-201ENSMUST00000121669 448 ntBASIC11.07□□□□□ -0.64
Npas1P97459 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.07□□□□□ -0.64
Npas1P97459 Gm38225-201ENSMUST00000194001 393 ntBASIC11.07□□□□□ -0.64
Npas1P97459 Gm37714-201ENSMUST00000194742 342 ntBASIC11.07□□□□□ -0.64
Npas1P97459 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Gm45453-201ENSMUST00000211758 853 ntBASIC11.07□□□□□ -0.64
Npas1P97459 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Npas1P97459 Mir125a-201ENSMUST00000083545 68 ntBASIC11.07□□□□□ -0.64
Npas1P97459 Mir497b-201ENSMUST00000093601 125 ntBASIC11.07□□□□□ -0.64
Npas1P97459 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.07□□□□□ -0.64
Npas1P97459 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Npas1P97459 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.07□□□□□ -0.64
Npas1P97459 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.07□□□□□ -0.64
Npas1P97459 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npas1P97459 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Npas1P97459 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.06□□□□□ -0.64
Npas1P97459 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Npas1P97459 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Npas1P97459 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Npas1P97459 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Npas1P97459 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Npas1P97459 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Gm1401-201ENSMUST00000122048 772 ntBASIC11.06□□□□□ -0.64
Npas1P97459 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.06□□□□□ -0.64
Npas1P97459 Gm17271-201ENSMUST00000165535 355 ntBASIC11.06□□□□□ -0.64
Npas1P97459 Gm27631-201ENSMUST00000184163 466 ntBASIC11.06□□□□□ -0.64
Npas1P97459 Mir8117-201ENSMUST00000184773 107 ntBASIC11.06□□□□□ -0.64
Npas1P97459 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.06□□□□□ -0.64
Npas1P97459 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Npas1P97459 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.06□□□□□ -0.64
Npas1P97459 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.06□□□□□ -0.64
Npas1P97459 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.06□□□□□ -0.64
Npas1P97459 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Npas1P97459 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Npas1P97459 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Npas1P97459 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.06□□□□□ -0.64
Npas1P97459 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Npas1P97459 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Npas1P97459 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Npas1P97459 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms