Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Stra8P70278 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Stra8P70278 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.24■□□□□ 0.51
Stra8P70278 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.24■□□□□ 0.51
Stra8P70278 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Stra8P70278 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC18.24■□□□□ 0.51
Stra8P70278 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.24■□□□□ 0.51
Stra8P70278 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Stra8P70278 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Stra8P70278 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Stra8P70278 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.23■□□□□ 0.51
Stra8P70278 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Stra8P70278 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC18.23■□□□□ 0.51
Stra8P70278 AC117194.1-201ENSMUST00000224847 3002 ntBASIC18.23■□□□□ 0.51
Stra8P70278 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC18.23■□□□□ 0.51
Stra8P70278 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Stra8P70278 Gm43417-201ENSMUST00000201586 5207 ntBASIC18.23■□□□□ 0.51
Stra8P70278 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Stra8P70278 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.23■□□□□ 0.51
Stra8P70278 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Stra8P70278 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Gm14719-201ENSMUST00000121891 340 ntBASIC18.22■□□□□ 0.51
Stra8P70278 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.22■□□□□ 0.51
Stra8P70278 Gm4804-201ENSMUST00000182234 999 ntBASIC18.22■□□□□ 0.51
Stra8P70278 Gm27838-201ENSMUST00000184829 128 ntBASIC18.22■□□□□ 0.51
Stra8P70278 Gm29667-201ENSMUST00000190817 490 ntBASIC18.22■□□□□ 0.51
Stra8P70278 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Gm10766-202ENSMUST00000194123 606 ntBASIC18.22■□□□□ 0.51
Stra8P70278 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.22■□□□□ 0.51
Stra8P70278 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Stra8P70278 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Stra8P70278 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Stra8P70278 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Stra8P70278 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Stra8P70278 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Stra8P70278 AC151895.1-201ENSMUST00000219025 1742 ntBASIC18.21■□□□□ 0.51
Stra8P70278 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Stra8P70278 Gm44851-201ENSMUST00000205735 2309 ntBASIC18.21■□□□□ 0.51
Stra8P70278 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms