Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.83□□□□□ -0.52
Cldn18P56857 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldn18P56857 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cldn18P56857 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.82□□□□□ -0.52
Cldn18P56857 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldn18P56857 Gm19931-201ENSMUST00000198920 368 ntBASIC11.82□□□□□ -0.52
Cldn18P56857 Gm7561-201ENSMUST00000211203 886 ntBASIC11.82□□□□□ -0.52
Cldn18P56857 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.82□□□□□ -0.52
Cldn18P56857 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldn18P56857 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.82□□□□□ -0.52
Cldn18P56857 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Gm6091-201ENSMUST00000098307 165 ntBASIC11.82□□□□□ -0.52
Cldn18P56857 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldn18P56857 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.82□□□□□ -0.52
Cldn18P56857 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn18P56857 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Gm12203-201ENSMUST00000118235 598 ntBASIC11.81□□□□□ -0.52
Cldn18P56857 Gm12209-201ENSMUST00000120089 596 ntBASIC11.81□□□□□ -0.52
Cldn18P56857 Gm13123-201ENSMUST00000122173 492 ntBASIC11.81□□□□□ -0.52
Cldn18P56857 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Gm22331-201ENSMUST00000158066 136 ntBASIC11.81□□□□□ -0.52
Cldn18P56857 Gm27847-201ENSMUST00000183711 107 ntBASIC11.81□□□□□ -0.52
Cldn18P56857 Gm27375-201ENSMUST00000183799 107 ntBASIC11.81□□□□□ -0.52
Cldn18P56857 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.81□□□□□ -0.52
Cldn18P56857 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.81□□□□□ -0.52
Cldn18P56857 Gm18041-201ENSMUST00000218210 618 ntBASIC11.81□□□□□ -0.52
Cldn18P56857 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.81□□□□□ -0.52
Cldn18P56857 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn18P56857 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cldn18P56857 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn18P56857 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.8□□□□□ -0.52
Cldn18P56857 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn18P56857 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Cldn18P56857 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cldn18P56857 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cldn18P56857 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Cldn18P56857 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.8□□□□□ -0.52
Cldn18P56857 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Cldn18P56857 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn18P56857 Gm24644-201ENSMUST00000157114 139 ntBASIC11.8□□□□□ -0.52
Cldn18P56857 Gm17150-201ENSMUST00000165577 381 ntBASIC11.8□□□□□ -0.52
Cldn18P56857 Gm37922-201ENSMUST00000195596 455 ntBASIC11.8□□□□□ -0.52
Cldn18P56857 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn18P56857 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.8□□□□□ -0.52
Cldn18P56857 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms