Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Lhx3P50481 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Lhx3P50481 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Lhx3P50481 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.35□□□□□ -0.27
Lhx3P50481 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Lhx3P50481 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Gm23931-201ENSMUST00000103842 109 ntBASIC13.35□□□□□ -0.27
Lhx3P50481 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.35□□□□□ -0.27
Lhx3P50481 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Snora78-201ENSMUST00000158630 128 ntBASIC13.35□□□□□ -0.27
Lhx3P50481 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Lhx3P50481 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.35□□□□□ -0.27
Lhx3P50481 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.35□□□□□ -0.27
Lhx3P50481 AY702102-202ENSMUST00000194651 1173 ntBASIC13.35□□□□□ -0.27
Lhx3P50481 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.35□□□□□ -0.27
Lhx3P50481 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.35□□□□□ -0.27
Lhx3P50481 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Lhx3P50481 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Lhx3P50481 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.34□□□□□ -0.27
Lhx3P50481 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.34□□□□□ -0.27
Lhx3P50481 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Lhx3P50481 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Lhx3P50481 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Gm12363-201ENSMUST00000122250 668 ntBASIC13.34□□□□□ -0.27
Lhx3P50481 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Gm26185-201ENSMUST00000157692 266 ntBASIC13.34□□□□□ -0.27
Lhx3P50481 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.34□□□□□ -0.27
Lhx3P50481 Gm37042-201ENSMUST00000193816 581 ntBASIC13.34□□□□□ -0.27
Lhx3P50481 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.34□□□□□ -0.27
Lhx3P50481 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Lhx3P50481 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.34□□□□□ -0.27
Lhx3P50481 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.34□□□□□ -0.27
Lhx3P50481 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.34□□□□□ -0.27
Lhx3P50481 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.34□□□□□ -0.27
Lhx3P50481 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.34□□□□□ -0.27
Lhx3P50481 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lhx3P50481 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Lhx3P50481 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms