Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.29□□□□□ -0.28
Fen1P39749 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Fen1P39749 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.29□□□□□ -0.28
Fen1P39749 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Fen1P39749 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Syt7-205ENSMUST00000224135 1557 ntBASIC13.28□□□□□ -0.28
Fen1P39749 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Fen1P39749 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Fen1P39749 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Fen1P39749 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.28□□□□□ -0.28
Fen1P39749 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Gm7774-201ENSMUST00000200064 533 ntBASIC13.28□□□□□ -0.28
Fen1P39749 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.28□□□□□ -0.28
Fen1P39749 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.28□□□□□ -0.28
Fen1P39749 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.28□□□□□ -0.28
Fen1P39749 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.28□□□□□ -0.28
Fen1P39749 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.28□□□□□ -0.28
Fen1P39749 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Fen1P39749 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Fen1P39749 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.28□□□□□ -0.28
Fen1P39749 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Fen1P39749 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fen1P39749 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Fen1P39749 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fen1P39749 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fen1P39749 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fen1P39749 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fen1P39749 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fen1P39749 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Fen1P39749 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Fen1P39749 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fen1P39749 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.27□□□□□ -0.28
Fen1P39749 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.27□□□□□ -0.28
Fen1P39749 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Fen1P39749 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Fen1P39749 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.27□□□□□ -0.28
Fen1P39749 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Fen1P39749 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.27□□□□□ -0.29
Fen1P39749 Gm13385-201ENSMUST00000121089 220 ntBASIC13.27□□□□□ -0.29
Fen1P39749 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.27□□□□□ -0.29
Fen1P39749 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.27□□□□□ -0.29
Fen1P39749 Gm24158-201ENSMUST00000175263 71 ntBASIC13.27□□□□□ -0.29
Fen1P39749 Gm27430-201ENSMUST00000184585 107 ntBASIC13.27□□□□□ -0.29
Fen1P39749 Gm44333-201ENSMUST00000197168 107 ntBASIC13.27□□□□□ -0.29
Fen1P39749 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.27□□□□□ -0.29
Fen1P39749 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Fen1P39749 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Fen1P39749 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Fen1P39749 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.27□□□□□ -0.29
Fen1P39749 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.27□□□□□ -0.29
Fen1P39749 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Fen1P39749 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Fen1P39749 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms