Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxa1P35582 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Foxa1P35582 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.21□□□□□ -0.46
Foxa1P35582 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxa1P35582 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxa1P35582 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Foxa1P35582 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.21□□□□□ -0.46
Foxa1P35582 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxa1P35582 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxa1P35582 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxa1P35582 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxa1P35582 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Foxa1P35582 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.2□□□□□ -0.46
Foxa1P35582 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Foxa1P35582 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Foxa1P35582 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Foxa1P35582 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.2□□□□□ -0.46
Foxa1P35582 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.2□□□□□ -0.46
Foxa1P35582 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Foxa1P35582 Gm16202-201ENSMUST00000117532 544 ntBASIC12.2□□□□□ -0.46
Foxa1P35582 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.2□□□□□ -0.46
Foxa1P35582 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.2□□□□□ -0.46
Foxa1P35582 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.2□□□□□ -0.46
Foxa1P35582 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.2□□□□□ -0.46
Foxa1P35582 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.2□□□□□ -0.46
Foxa1P35582 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Gm5035-201ENSMUST00000215581 927 ntBASIC12.2□□□□□ -0.46
Foxa1P35582 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Foxa1P35582 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.2□□□□□ -0.46
Foxa1P35582 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.2□□□□□ -0.46
Foxa1P35582 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Foxa1P35582 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Foxa1P35582 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Foxa1P35582 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.19□□□□□ -0.46
Foxa1P35582 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.19□□□□□ -0.46
Foxa1P35582 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.19□□□□□ -0.46
Foxa1P35582 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.19□□□□□ -0.46
Foxa1P35582 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.19□□□□□ -0.46
Foxa1P35582 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.19□□□□□ -0.46
Foxa1P35582 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.19□□□□□ -0.46
Foxa1P35582 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Gm5745-201ENSMUST00000183748 313 ntBASIC12.19□□□□□ -0.46
Foxa1P35582 Gm44069-201ENSMUST00000204898 506 ntBASIC12.19□□□□□ -0.46
Foxa1P35582 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Gm16372-201ENSMUST00000073088 450 ntBASIC12.19□□□□□ -0.46
Foxa1P35582 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Foxa1P35582 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Foxa1P35582 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.18□□□□□ -0.46
Foxa1P35582 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms