Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc11P31313 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Hoxc11P31313 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc11P31313 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc11P31313 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc11P31313 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxc11P31313 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.82□□□□□ -0.36
Hoxc11P31313 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc11P31313 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc11P31313 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Hoxc11P31313 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc11P31313 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxc11P31313 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.81□□□□□ -0.36
Hoxc11P31313 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxc11P31313 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxc11P31313 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm12403-201ENSMUST00000121384 959 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.81□□□□□ -0.36
Hoxc11P31313 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm40466-201ENSMUST00000212174 422 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxc11P31313 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxc11P31313 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hoxc11P31313 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc11P31313 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.81□□□□□ -0.36
Hoxc11P31313 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxc11P31313 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Gm27331-201ENSMUST00000183705 60 ntBASIC12.8□□□□□ -0.36
Hoxc11P31313 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc11P31313 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc11P31313 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms