Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VtnP29788 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.98□□□□□ -0.49
VtnP29788 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.98□□□□□ -0.49
VtnP29788 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VtnP29788 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Grk6-205ENSMUST00000224653 2976 ntBASIC11.97□□□□□ -0.49
VtnP29788 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VtnP29788 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Rubie-203ENSMUST00000227803 2430 ntBASIC11.97□□□□□ -0.49
VtnP29788 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
VtnP29788 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.97□□□□□ -0.49
VtnP29788 Gm12957-201ENSMUST00000117835 377 ntBASIC11.97□□□□□ -0.49
VtnP29788 Gm13226-201ENSMUST00000117838 404 ntBASIC11.97□□□□□ -0.49
VtnP29788 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.97□□□□□ -0.49
VtnP29788 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.97□□□□□ -0.49
VtnP29788 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Gm27486-201ENSMUST00000184923 80 ntBASIC11.97□□□□□ -0.49
VtnP29788 Mir6420-201ENSMUST00000185032 102 ntBASIC11.97□□□□□ -0.49
VtnP29788 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.97□□□□□ -0.49
VtnP29788 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.97□□□□□ -0.49
VtnP29788 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VtnP29788 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.97□□□□□ -0.49
VtnP29788 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.97□□□□□ -0.49
VtnP29788 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.97□□□□□ -0.49
VtnP29788 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
VtnP29788 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Gm6091-201ENSMUST00000098307 165 ntBASIC11.97□□□□□ -0.49
VtnP29788 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.97□□□□□ -0.49
VtnP29788 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.97□□□□□ -0.49
VtnP29788 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.97□□□□□ -0.49
VtnP29788 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VtnP29788 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.96□□□□□ -0.49
VtnP29788 Gm6152-201ENSMUST00000151704 340 ntBASIC11.96□□□□□ -0.49
VtnP29788 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.96□□□□□ -0.49
VtnP29788 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
VtnP29788 Gm38671-201ENSMUST00000200573 130 ntBASIC11.96□□□□□ -0.49
VtnP29788 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
VtnP29788 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Gm18473-201ENSMUST00000220543 868 ntBASIC11.96□□□□□ -0.49
VtnP29788 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.96□□□□□ -0.49
VtnP29788 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VtnP29788 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VtnP29788 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VtnP29788 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VtnP29788 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VtnP29788 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VtnP29788 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VtnP29788 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VtnP29788 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
VtnP29788 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.95□□□□□ -0.5
VtnP29788 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VtnP29788 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VtnP29788 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.95□□□□□ -0.5
VtnP29788 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
VtnP29788 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
VtnP29788 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VtnP29788 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.95□□□□□ -0.5
VtnP29788 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VtnP29788 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms