Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.54□□□□□ -0.4
Rpl3P27659 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl3P27659 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rpl3P27659 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.54□□□□□ -0.4
Rpl3P27659 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Rpl3P27659 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl3P27659 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl3P27659 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl3P27659 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rpl3P27659 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.53□□□□□ -0.4
Rpl3P27659 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rpl3P27659 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.53□□□□□ -0.4
Rpl3P27659 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rpl3P27659 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpl3P27659 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rpl3P27659 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.53□□□□□ -0.4
Rpl3P27659 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.53□□□□□ -0.4
Rpl3P27659 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl3P27659 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Rpl3P27659 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpl3P27659 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl3P27659 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl3P27659 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Rpl3P27659 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl3P27659 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.52□□□□□ -0.4
Rpl3P27659 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl3P27659 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl3P27659 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rpl3P27659 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl3P27659 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.52□□□□□ -0.4
Rpl3P27659 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl3P27659 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.52□□□□□ -0.41
Rpl3P27659 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rpl3P27659 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.52□□□□□ -0.41
Rpl3P27659 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.52□□□□□ -0.41
Rpl3P27659 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.52□□□□□ -0.41
Rpl3P27659 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl3P27659 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Rpl3P27659 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.51□□□□□ -0.41
Rpl3P27659 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl3P27659 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl3P27659 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl3P27659 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl3P27659 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl3P27659 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl3P27659 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl3P27659 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl3P27659 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.51□□□□□ -0.41
Rpl3P27659 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl3P27659 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl3P27659 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms