Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.43□□□□□ -0.26
Hmga1P17095 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmga1P17095 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Hmga1P17095 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.43□□□□□ -0.26
Hmga1P17095 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Gm15370-201ENSMUST00000117158 253 ntBASIC13.43□□□□□ -0.26
Hmga1P17095 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.43□□□□□ -0.26
Hmga1P17095 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.43□□□□□ -0.26
Hmga1P17095 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.43□□□□□ -0.26
Hmga1P17095 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmga1P17095 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.43□□□□□ -0.26
Hmga1P17095 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.43□□□□□ -0.26
Hmga1P17095 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.43□□□□□ -0.26
Hmga1P17095 Gm7783-201ENSMUST00000204795 781 ntBASIC13.43□□□□□ -0.26
Hmga1P17095 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.43□□□□□ -0.26
Hmga1P17095 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Hmga1P17095 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Hmga1P17095 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmga1P17095 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Hmga1P17095 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmga1P17095 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Hmga1P17095 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.43□□□□□ -0.26
Hmga1P17095 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.43□□□□□ -0.26
Hmga1P17095 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmga1P17095 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.42□□□□□ -0.26
Hmga1P17095 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Hmga1P17095 Gm12241-201ENSMUST00000118330 726 ntBASIC13.42□□□□□ -0.26
Hmga1P17095 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.42□□□□□ -0.26
Hmga1P17095 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.42□□□□□ -0.26
Hmga1P17095 Gm13316-201ENSMUST00000140537 691 ntBASIC13.42□□□□□ -0.26
Hmga1P17095 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.42□□□□□ -0.26
Hmga1P17095 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.42□□□□□ -0.26
Hmga1P17095 Gm7584-201ENSMUST00000175829 940 ntBASIC13.42□□□□□ -0.26
Hmga1P17095 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.42□□□□□ -0.26
Hmga1P17095 Mospd4-201ENSMUST00000180618 576 ntBASIC13.42□□□□□ -0.26
Hmga1P17095 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.42□□□□□ -0.26
Hmga1P17095 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Hmga1P17095 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.42□□□□□ -0.26
Hmga1P17095 Gm9257-201ENSMUST00000221254 232 ntBASIC13.42□□□□□ -0.26
Hmga1P17095 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.42□□□□□ -0.26
Hmga1P17095 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Hmga1P17095 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.42□□□□□ -0.26
Hmga1P17095 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmga1P17095 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.41□□□□□ -0.26
Hmga1P17095 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Matn2-206ENSMUST00000228570 2798 ntBASIC13.41□□□□□ -0.26
Hmga1P17095 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Gm13350-201ENSMUST00000120519 479 ntBASIC13.41□□□□□ -0.26
Hmga1P17095 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Hmga1P17095 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.41□□□□□ -0.26
Hmga1P17095 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Gm6621-201ENSMUST00000193251 772 ntBASIC13.41□□□□□ -0.26
Hmga1P17095 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmga1P17095 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms