Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Hoxc9P09633 Gm25043-201ENSMUST00000158604 212 ntBASIC16.99■□□□□ 0.31
Hoxc9P09633 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.99■□□□□ 0.31
Hoxc9P09633 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.99■□□□□ 0.31
Hoxc9P09633 AC166095.1-201ENSMUST00000223731 1241 ntBASIC16.99■□□□□ 0.31
Hoxc9P09633 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Hoxc9P09633 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hoxc9P09633 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Gm11439-201ENSMUST00000118598 409 ntBASIC16.98■□□□□ 0.31
Hoxc9P09633 Gm12058-201ENSMUST00000118614 437 ntBASIC16.98■□□□□ 0.31
Hoxc9P09633 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.98■□□□□ 0.31
Hoxc9P09633 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Gm27341-201ENSMUST00000183570 106 ntBASIC16.98■□□□□ 0.31
Hoxc9P09633 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.98■□□□□ 0.31
Hoxc9P09633 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.98■□□□□ 0.31
Hoxc9P09633 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC16.98■□□□□ 0.31
Hoxc9P09633 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.98■□□□□ 0.31
Hoxc9P09633 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.98■□□□□ 0.31
Hoxc9P09633 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Hoxc9P09633 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.98■□□□□ 0.31
Hoxc9P09633 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hoxc9P09633 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.97■□□□□ 0.31
Hoxc9P09633 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.97■□□□□ 0.31
Hoxc9P09633 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.97■□□□□ 0.31
Hoxc9P09633 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Hoxc9P09633 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.97■□□□□ 0.31
Hoxc9P09633 Gm13736-201ENSMUST00000119272 253 ntBASIC16.97■□□□□ 0.31
Hoxc9P09633 Gm15547-201ENSMUST00000122152 333 ntBASIC16.97■□□□□ 0.31
Hoxc9P09633 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC16.97■□□□□ 0.31
Hoxc9P09633 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC16.97■□□□□ 0.31
Hoxc9P09633 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.97■□□□□ 0.31
Hoxc9P09633 Gm8712-201ENSMUST00000221090 701 ntBASIC16.97■□□□□ 0.31
Hoxc9P09633 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Hoxc9P09633 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Hoxc9P09633 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Hoxc9P09633 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.97■□□□□ 0.31
Hoxc9P09633 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Hoxc9P09633 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Hoxc9P09633 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Hoxc9P09633 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Hoxc9P09633 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.96■□□□□ 0.31
Hoxc9P09633 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.96■□□□□ 0.31
Hoxc9P09633 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.96■□□□□ 0.31
Hoxc9P09633 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.96■□□□□ 0.31
Hoxc9P09633 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Hoxc9P09633 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Hoxc9P09633 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms