Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Hoxa3P02831 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Hoxa3P02831 Gm45784-201ENSMUST00000188360 142 ntBASIC11.09□□□□□ -0.63
Hoxa3P02831 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.09□□□□□ -0.63
Hoxa3P02831 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.09□□□□□ -0.63
Hoxa3P02831 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Hoxa3P02831 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.09□□□□□ -0.63
Hoxa3P02831 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.09□□□□□ -0.63
Hoxa3P02831 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxa3P02831 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hoxa3P02831 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.09□□□□□ -0.63
Hoxa3P02831 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.09□□□□□ -0.63
Hoxa3P02831 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hoxa3P02831 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Hoxa3P02831 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Hoxa3P02831 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Hoxa3P02831 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxa3P02831 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.08□□□□□ -0.64
Hoxa3P02831 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hoxa3P02831 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
Hoxa3P02831 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm12957-201ENSMUST00000117835 377 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm8810-201ENSMUST00000172895 754 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm29649-201ENSMUST00000185649 419 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm9899-201ENSMUST00000065519 555 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Hoxa3P02831 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hoxa3P02831 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.08□□□□□ -0.64
Hoxa3P02831 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hoxa3P02831 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hoxa3P02831 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxa3P02831 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.07□□□□□ -0.64
Hoxa3P02831 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxa3P02831 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms